CDS
Accession Number | TCMCG006C04767 |
gbkey | CDS |
Protein Id | XP_022571873.1 |
Location | complement(join(18590957..18591031,18591144..18591212,18591310..18591387,18591522..18591588,18591681..18591785,18591885..18592417,18592500..18592681,18592883..18593501,18593580..18593631,18593811..18594352,18594457..18594651,18594822..18595523,18595606..18595849,18596143..18596283,18596361..18596745,18596805..18597636,18597802..18598896,18598979..18599026)) |
Gene | LOC106438833 |
GeneID | 106438833 |
Organism | Brassica napus |
Protein
Length | 1987aa |
Molecule type | protein |
Topology | linear |
Data_file_division | PLN |
dblink | BioProject:PRJNA293435 |
db_source | XM_022716152.1 |
Definition | E3 ubiquitin-protein ligase PRT6-like [Brassica napus] |
EGGNOG-MAPPER Annotation
Sequence
CDS: ATGGAGGACGACTCGCCTCTTCCCAGCTCACAAGAGTTTCTCCTCCAGAGGCTTGCCTTTGTTAGGGTTCCTAAAGAGTGCTGCTCCAAACGTGGCCTAGTGGAGTTCGTTAGAGCTAGCCACCAGTCCATGATCTCAGAGCTAGTCTCTGCTCTCTTACCTACTGATGAGGATGTTAACGCTGGATTGAAGGAAGCTATGGAAAAGTTTCGGAAGCCTACCATGAAAAAGAGGTTAAGAGAGAGCATGAACTGGCTCCAGTGGTTGATGTTCCGGGACGAGCCTGGTGTTTCTTTGAAGGATCTGGCTAAACTGAATGTTGATCAGCGAGGCGTCTGTGGCTCCGTATGGGGACACAATGATATAGCGTATAGGTGTAGGACATGCGAGAATGACCCAACCTGTGCTATCTGCGTGCCTTGTTTCGAGAATGGGGATCACAGCTCCCACGATTATTCCATCATCTACACAGGCGGTGGTTGTTGTGATTGTGGGGATGAGACGGCGTGGAAACGGGAGGGTTTCTGTTCGAAGCATAAAGGTTCTGAACAGATTCAGCCCCTCTCAGGAGATCTTGCAGATTCAGTTGGGCCTGTCCTTGATGCTCTTTTTGCTTGTTGGAATAACAAGCTCTTATCTGCAGAAAGTATTAGAGATGCCAGATCCAACGATGCTTCTTCTGCAGTGGTCCAAAAGATGTCAAACGAGCTGACGTTTGTAGTGGTTGAAATGCTTCTGGAGTTCTGCAAGTCCAGTGAGAGTTTGTTGAGTTTCGTTTCTCGAAGGATTATCTCTTCAAGTGGTCTACTGGATATTCTCGTAAAGGCTGAGAGGTTCTTGGACCAAGATGCTATGAAGAAACTACATGACCTGTTCCTCAAATTGATAGCTGATCCCGTCTTTAAGTCGGAATTTGCGAAAGCGTTTGTGAGTTACTATCCGCTTGTCATAAGTGAAGCGGTTAAGCAGGGTGATGATAATGCATTCAGGAAATATCCACTACTGTCTACATTTTCTGTGCAAATCTTCACCGTGCCGACTCTAACACCGTTTCTGGTAAAGGAAATGAATTTGCTAGCTATGCTTTTAGGATGCCTCAGTGAGATCTTTCTTTCTTGTTCTGGAGAGGATGGTGTGGTTCAGGCTACAAAGTGGGAACGGGTGTGTAAGACCAGCGACCGTGTCATTGACGATTTGAAATTTGTTCTGAGCCATGCTGCAGTTTCCAAGTATGCAACACATGAACATCGGGAGTTGTCAAGATCATGGTTGATACTCTTGGCCTTTGCTCAAGGAATGAATCCTCTAAAAAGAGAGACTGGAATCCATATTGAAGAAGAAAATGAGTACATGAATTTGTTCTTTGTTTTGGGTCATTCAATAGCGGTTATTCACTCTCTGCTGGTTACTGGTACATATTCTGCTGCCAGTGATGAAGAAATAGAAAATGAGAGAATCACCAAGGTAGGACTTGATACGTGTGATGGAGATGGAGAAAGGTATGCAAAAGTTGGGAGATTGTCTCATGAAGATTCGGTATGTACTGCGATGGAAAGCAGCAGCTCATCTGATAGCTCGATGGCCTCTGCAGTCCACAAAATTGACCCTTTCTGTGCTCTGCTTCCTTCTTCTGCCACATGGTTGATACGCGAGTGTTTGAAAGTTCTGGAGACATGCCTAGGAGACGATGAAGGTGTATCAAAATTTCTTTGCAAGTTGTGTTCTCCTAGCGGTAGAAACATCCCTGGCAGCAAGATCTCGTGGCCAAGCAGAAAATTGTTAAAGGTTGAAATTGGAAGAAGTGTATCTAGTGGTCTTGCCGGTTCCAGTAGAGATCCAAGTACTGGCTTATCACCTCTGTGCGGCGATATACACACAGATCCTAGCTTGGATAATGTTGGTGGATTTAATGGGGAGGTTCAGACAGATGTCACGGCTTACTCTAGGAGAGTTTCTTGCAACTCTCTATACAATTATCAGGCCAAGAAAGCATCAGAAATACACATACTTGGTCTGTGTGATTGGCCGGACATACACTACGATGTGAGCTCTCAGGCCATATCTATTCATCTACCGATTCATCGGTTACTATCTTTGCTTATACAAAAAGCATTAGGGATGTGTTATGGAGAATCTGCATTGCAACATGGAGCCAATGTTAGTCATGAGATCCCTCATACCGACTTCTTCAGCTATGTGTTAGGAGATTGTCATCCTCATGGATTTTCAGCTCTTGTTATGGAGCATGTGGTCCGGCTTAGGGTGTTCTGTGCCCAAGTTACTGCTGGAATGTGGAAGAAGAATGGGGATTCTGCATTAGTATCTTGTGAGTGGTATCGCTCAGTTCGCTCAGTTCGCTGGTCAGAACAGGGACTTGAGCTTGATCTATTTCTTCTACAATGTTGTGGTGCGTTGGCTCCCGCAGATTCTTATGTTAATAAGCTTCTTTCTCGGTTTGGGCTCTCGAGCTATCTTTCCCTAAACCCCGATACAACAAATGAGTATGAAGCAGTTTTGGTCCAAGAAATGCTTGCTCTTCTGATACAGATTCTGCAAGAAAGGCGATTTTGTGGTCTTTCTACTACTGAAAGTTTGAGAAGAGAGATCATCTTCAACTTAGCCACTAAAGATTTCACTCATAGTCAATTGGTCAAATCTTTACCCCGTGATTTGTCCAAGTCAGATGAGCTCCAGGAGGTCTTAGACGACGTTTCAGTCTTTAGTAATCCATCCGGAATGAACCAGGGAAAGTATTCACTACGGGCATCTTGTTGGAAGGAACTGGATCTCTACCACCCTCGTTGGAATTCAAGAGAATTGCAATCTGCAGAAGAAAGGTTTTCACGCTATTGTGGAGTGTCTGCGCTGACCACTCAACTTCCTAGATGGAAGATGATCTACCAGCCTCTAAAGGGTCTTGCTAGAATAGGCACTTGCAAAGCCACATTTCAAATCATTTGCGCTGCTTTGTACTACGCACTACAGAGTGGTACATCTATTAAATCACGCGCTCCTGATGGCGTTCTCATAAGTGCACTGCACTTACTCTCGTTATCATTGGATATTTGCACTCAGCAAAGGGAATCTAATCGGCAGGCCTGTTACGTAGAAGATTCAATTCCTATTCTCGAATTAGCTGGTCTAGAAATAATTGGTACAAATCAAGGGATGGGAAAGCAAAGTTTGTTGTCTCTTCTTGTTTCAGTAATGAGGAAACGTAAAGACGATGGTCTCCATCAATTTTCAGAGGCAGGCAGTTGCAATATATCGTCCTGGATTCGAGATCTGCTGAAGAAGTTCAGTGCAATTGATTCTGTTTGTATGAACCTCTTGCAAAGTCTTGCCCCGGAGGCGGTCGGTCAATCTGAGTTTGATAAAGTCACATCAGGCTCTACTTCTGATGAGAAACGCAAGGCTAAAGCTAGAGAGAGGCAGGCTGCTATACTGGCAAAAATGAAAGCTGAACAATCAAAATTCTTGTCTACCTTGAGTTCCAGCATGGATGGTGATGATCCAGTATCTGAAACTGAAAAAAGTGATTTTGTGATGGAACATGATTCAGAAATTTCTGTTCGTGAAGTTTGCTCCCTCTGCCATGACCCAGATTCCAAAGACCCGGTTTCTTTCTTGATTTTTCTCCAGAAATCTAAAGTTTTGAGTTTTGTGGATAGAGGCCCTCCATCTTGGGATCAATGTCCACAGTTTGAAAAGACGATTCCTGTGTCTGGGTCTACTAATGTGCTACAGTTATCAGATGATGCAACCTCTGAGTCTAGGACAGATTCTGTGCTTGAAGCTTTAACAGCCCGGCTTATAGGGAATGGTCAGAAGGAGAAGAGGTCTAGCGATGGGAGGGGAAAAGATGAATCAGACATGGAATCATTGGAGATGGCTATGTATCAAACTGTTCGCAGAAAAGTTGAAATGATAAATCAAAGCCATGCACATGTTGATCATCAACGGCATGATGATGCTGAAAGTAGTTCGGAGAGAAGTTCTGTTGGTGCTCTATCTACTTTGCAAGTTAGATTACCTGATAGTGGACAAAAACAAACCTCCAGACATCCAGATGTCAGTTTCGATGGGTTTCACCCAACCGACTGTGACGGAGTTTATCTTTCGTCATGTGGACATGCTGTGCATCAAATCTGTCTTGAACGATATTTAAAGTCCTTAAAGGAAAGGTCTGAGAGAAGAAATGTCTTTGAAGGTGCACATATCGTGGATCTTGCACAGGGAGAATTTCTCTGTCCTGCATGCCGCCGACTAGCTAATTCTGTATTGCCTGCATGTCCTGGAGATTTATGTTCCGTCTCAAAGCTACAAGAAAGTTTGTTTGCTAAGTTAGGTGGATCAGATGCACAAATGCCTTCTCTTTGGCTCTCTGAAGCGTTGTGTCTTCTGCAATCTGCTGCAGATGCGATTGAAGATGGCGATATTGTTAAAAACGTTTCTCTGCAAGGAGATGAGCGAAGAAGGAAAGATCTTGAATCTGTCTCCAACAAGCTCTGGAATTTCTATTTTGCTAAGCGACAGGACAAACCTCCTGGAACTTCTTGGCAGCCACAATCAATCCTCATGTGGGACACCCTTAAGTACTCTCTTATTTCAGTGGAAATTATTACTCGTTGTGCGAAGAATTCGATGTGTCCTGTGTATTGTATTGGCTCCTTGTATGAAGAGCTTAACACTTCTAAGGGAACTGCTTTGTCACTCTTATTACGAGTGGTACAGAGCACCCGAACAAAGAGTGCTTTACATGTCCGTCAGAGATTTATGGGTATGAGGCATCTTGCGGAGTCTATATGCTCTGGAGTTTCAAGTAGTTCTTCGAGCAGCATATTCGGAAGTGAAGGAACGGTAGGTTCGATGAAGCATATAAACCTGCTCTGGAACCGAGCATCTGATCCAGTTCTTGCCCATGACCCATTTTCATCATTGATGTGGGCTCTCTTTTGTCTCCCATCTCCTTTTATCACATGCGAGGAATCTCTATTATCACTTGTGCATCTTTTCCACAGTGTCTCTCTTGTTCAGACTGTAATTGCCTATTGTGTAGGCCGCCTGTGTGACTTGAGCGAGTTAGATTTTGAGGAAAATCTTCTTAGGGATATCTCCATCGCTTTGAGAGAATCAGGTGGTTGGGGATATTTCAGGTCTAACCATATGGATTTATCATGTGATATAAAAGAGACAATCCGTAAATATAGTCTCCCTTTCTTGAGGAGATGTGCATTGTTGTGGAGGCTACTGAAAACTAGTCCTGGGAAGTTTCATCAAGAGGTAGATATGTTCGATGTTCCCTCTGACTCCACCAACGACAGTATGGACTTCATGTATGGTCCCAAATCTGAGCTGAATCATGTGCATGAATTGGAGAAAATGTTCAAGATTCCCCCTATCGATACCATTCTTAGTGATGAGCTTCTCCGGTCTTCAACACAAAAATGGCTTCGTCACTTTCAGAAGGAATACAGCGTTAACAGAGTTAAAGGGCCTCTTTGCATAACCCCCGTAGTTCCTTTCCAGCTTATGAAATTACCCAATCTATACCAGGATCTAATTCAAAGGTGTATCAAAAAACCTTGCAGCAACTGCACGAAAGTTATAGAAGAACCTGCATTATGTCTTCTTTGTGGAAGGTTGTGTTCTCCCATATGGAACCCTTGTTGCAGAGAAAGTAGTTGTCAGACTCATGCAGTAACCTGTGGTGCTGGTACCGGTGTATATCTTCTGATACGGCGGACCACAATTTTGCTACAGAGATTTGCTAGACAATCACCTTGGCCGTCTCCGTACTTGGATACGTTTGGAGAAGAGGATATCGAAATGATCAGAGGAAAGCCACTCTACCTGAATGAAGAACGTTATGCTGCATTAACTTACATGGTTGGTTCTTATGGACTGGATCACATTTCGAAAGTTCTCAATCAAACCACAATCGGAGGAGCCTTCTTCACTTGA |
Protein: MEDDSPLPSSQEFLLQRLAFVRVPKECCSKRGLVEFVRASHQSMISELVSALLPTDEDVNAGLKEAMEKFRKPTMKKRLRESMNWLQWLMFRDEPGVSLKDLAKLNVDQRGVCGSVWGHNDIAYRCRTCENDPTCAICVPCFENGDHSSHDYSIIYTGGGCCDCGDETAWKREGFCSKHKGSEQIQPLSGDLADSVGPVLDALFACWNNKLLSAESIRDARSNDASSAVVQKMSNELTFVVVEMLLEFCKSSESLLSFVSRRIISSSGLLDILVKAERFLDQDAMKKLHDLFLKLIADPVFKSEFAKAFVSYYPLVISEAVKQGDDNAFRKYPLLSTFSVQIFTVPTLTPFLVKEMNLLAMLLGCLSEIFLSCSGEDGVVQATKWERVCKTSDRVIDDLKFVLSHAAVSKYATHEHRELSRSWLILLAFAQGMNPLKRETGIHIEEENEYMNLFFVLGHSIAVIHSLLVTGTYSAASDEEIENERITKVGLDTCDGDGERYAKVGRLSHEDSVCTAMESSSSSDSSMASAVHKIDPFCALLPSSATWLIRECLKVLETCLGDDEGVSKFLCKLCSPSGRNIPGSKISWPSRKLLKVEIGRSVSSGLAGSSRDPSTGLSPLCGDIHTDPSLDNVGGFNGEVQTDVTAYSRRVSCNSLYNYQAKKASEIHILGLCDWPDIHYDVSSQAISIHLPIHRLLSLLIQKALGMCYGESALQHGANVSHEIPHTDFFSYVLGDCHPHGFSALVMEHVVRLRVFCAQVTAGMWKKNGDSALVSCEWYRSVRSVRWSEQGLELDLFLLQCCGALAPADSYVNKLLSRFGLSSYLSLNPDTTNEYEAVLVQEMLALLIQILQERRFCGLSTTESLRREIIFNLATKDFTHSQLVKSLPRDLSKSDELQEVLDDVSVFSNPSGMNQGKYSLRASCWKELDLYHPRWNSRELQSAEERFSRYCGVSALTTQLPRWKMIYQPLKGLARIGTCKATFQIICAALYYALQSGTSIKSRAPDGVLISALHLLSLSLDICTQQRESNRQACYVEDSIPILELAGLEIIGTNQGMGKQSLLSLLVSVMRKRKDDGLHQFSEAGSCNISSWIRDLLKKFSAIDSVCMNLLQSLAPEAVGQSEFDKVTSGSTSDEKRKAKARERQAAILAKMKAEQSKFLSTLSSSMDGDDPVSETEKSDFVMEHDSEISVREVCSLCHDPDSKDPVSFLIFLQKSKVLSFVDRGPPSWDQCPQFEKTIPVSGSTNVLQLSDDATSESRTDSVLEALTARLIGNGQKEKRSSDGRGKDESDMESLEMAMYQTVRRKVEMINQSHAHVDHQRHDDAESSSERSSVGALSTLQVRLPDSGQKQTSRHPDVSFDGFHPTDCDGVYLSSCGHAVHQICLERYLKSLKERSERRNVFEGAHIVDLAQGEFLCPACRRLANSVLPACPGDLCSVSKLQESLFAKLGGSDAQMPSLWLSEALCLLQSAADAIEDGDIVKNVSLQGDERRRKDLESVSNKLWNFYFAKRQDKPPGTSWQPQSILMWDTLKYSLISVEIITRCAKNSMCPVYCIGSLYEELNTSKGTALSLLLRVVQSTRTKSALHVRQRFMGMRHLAESICSGVSSSSSSSIFGSEGTVGSMKHINLLWNRASDPVLAHDPFSSLMWALFCLPSPFITCEESLLSLVHLFHSVSLVQTVIAYCVGRLCDLSELDFEENLLRDISIALRESGGWGYFRSNHMDLSCDIKETIRKYSLPFLRRCALLWRLLKTSPGKFHQEVDMFDVPSDSTNDSMDFMYGPKSELNHVHELEKMFKIPPIDTILSDELLRSSTQKWLRHFQKEYSVNRVKGPLCITPVVPFQLMKLPNLYQDLIQRCIKKPCSNCTKVIEEPALCLLCGRLCSPIWNPCCRESSCQTHAVTCGAGTGVYLLIRRTTILLQRFARQSPWPSPYLDTFGEEDIEMIRGKPLYLNEERYAALTYMVGSYGLDHISKVLNQTTIGGAFFT |